This is a collaborative space. In order to contribute, send an email to maximilien.chaumon@icm-institute.org
On any page, type the letter L on your keyboard to add a "Label" to the page, which will make search easier.
MEG-EEG technical guides
Various useful themes for conducting experiments at the MEG-EEG center are listed below.
Search here through all examples and tutorials.
Basic guidelines to prepare an MEG/EEG experiment
Preliminary steps, design, ethics, lundis du CENIR, booking and fees...
Essential analysis steps
A guide for running standard analysis steps at the center.
Scenarios
Full-fledged analysis protocols, from raw data to figures
General information
These guides explain the computing environment of the center.
- New users
- Setting up your linux environment
- Where are my data?
- Share data with owncloud
- Organisational recommendations : subjects, scripts, where and how
- Software available at the center
- Useful free software
- Using the computing cluster of the ICM
- VPN: connect from outside
- Remote desktop connection
- Python
- Create a linux script
- ICM owncloud calendar
- Open datasets
- Which computer to use for Maxfilter?
- Working on the command line on a linux computer at the CENIR
- Installations pour R sur machines linux
Main external toolboxes
Tutorials with the main external toobloxes used at the CENIR.
CENIR toolboxes
This is the list of data processing tutorials using the CENIR tools.
- compilation matlab + spm
- Using Maxfilter
- Datahandler
- Multiconv
- Muse
- fast_stat
- fast_tf
- Logiciels de stimulation
- FreeSurfer segmentation
- Eyelink processing
- Mega toolbox
- Network causality
- Combiner magnétomètres et gradiomètres
- Detect and mark bad data segments
- Manipulate markers
- Use ICA to subtract blink and cardiac activity
- Eyelink basic preprocessing with dataHandler
Useful software and on line tools
There are numerous very useful tools to organize, communicate, decide... Most famous commercial software has at least one free alternative. This page is a short guide to useful software for CENIR users.