This is a collaborative space. In order to contribute, send an email to maximilien.chaumon@icm-institute.org
On any page, type the letter L on your keyboard to add a "Label" to the page, which will make search easier.
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The CENIR
The Centre de Neuroimagerie de Recherche (CENIR) of the ICM provides facilities and support for human anatomical and functional neuroimaging exploration of human brain function. It is dedicated to basic research in integrative, cognitive and clinical neuroscience in healthy and patient human populations.
We are located on the ground floor of the ICM, a world-class research institute in all fields of neuroscience, from molecules to cognition.
This wiki
This wiki is a collaborative website on which technical and administrative information on projects run at the center are explained. For confidentiality reasons, the experimental protocols currently running at the CENIR are not presented, nor are their results. We provide only information about what is possible to do at the center, and how, where, with whom...
Only registered wiki users can modify or create pages on this website. If you wish to do so, please send an email to maximilien.chaumon@icm-institute.org
Knowledge base of the MEG-EEG center
This is the main resource of this website. Here, you will find everything you need to know to conduct an experiment at the MEG-EEG center of the CENIR.
- Réflexion sur le suivi des traitements de manips
- MEG-EEG technical guides — Everything you've always wanted to know about running and analyzing an experiment but were afraid to ask...
- Essential analysis steps — A guide for running standard analysis steps at the center.
- Scenarios — Full-fledged analysis protocols, from raw data to figures
- CENIR toolboxes — How to use our home made software.
- External toolboxes — Tutorials with the main external toobloxes used at the CENIR.
- Getting ready to run an MEG-EEG experiment — Preliminary steps, design, ethics, lundis du CENIR, booking and fees...
- Useful teaching/learning material — Lectures, slides, talks, and papers.
- Useful references
- General information — File system, available data and software, scripts, remote desktop, calendar...
- New users — Get a badge and a computer account to start with...
- Setting up your linux environment
- Where are my data?
- Share data with owncloud
- Organisational recommendations : subjects, scripts, where and how
- Software available at the center — Find and easily load/unload software at the center.
- Useful free software — There are numerous very useful tools to organize, communicate, decide... Most famous commercial software has at least one free alternative. This page is a short guide to useful software for CENIR users.
- Using the computing cluster of the ICM — Need to use 300 computers? 256GB memory? it's here!
- VPN: connect from outside — Access your data, computer, cluster from anywhere.
- Remote desktop connection — Interact with computer from anywhere, as if you were sitting in front of it.
- Python
- Create a linux script
- ICM owncloud calendar
- Open datasets — Open datasets available on the local network.
- Which computer to use for Maxfilter?
- Working on the command line on a linux computer at the CENIR
- Installations pour R sur machines linux
- Using Globus file transfer service
- BRAINLIFE project
Les services du CENIR (fr)
La plateforme MEG-EEG
La plateforme MEG-EEG dispose de plusieurs systèmes d'acquisition de données électrophysiologiques humaines, ainsi que d'un environnement logiciel pour le traitement, l'exploration et l'analyse des données électrophysiologiques.
