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app-get-events

app under development Private app on bl

This App writes a BIDS compliant events.tsv. This file can contain existing events, extracted from the meg.fif using mne.find_events, or events created with mne.make_fixed_length_events.

 

GitHub repository

GitHub - brainlife/app-get-events: Extract existing events from a fif file or create new events and store them in a .tsv file.

 

Brainlife datatype used:

 

Inputs of the App

Files

Format

Datatype

Description

Optional

Files

Format

Datatype

Description

Optional

MEG signals

.fif

meg/fif

The data can contain events or be resting state data

No

 

Outputs of the App:

Files

Format

Datatype

Description

Files

Format

Datatype

Description

events

.tsv

meg/fif-override

BIDS compliant events.tsv

Besides, in the output directory, there are the optional files that can be used in a next App (see How to run Apps one after another).

 

Parameters of the App

The parameters of the App correspond to the parameters passed to the Python functions used in the App. Their default values proposed in Brainlife or in config.json.example correspond to the default values of MNE Python 0.23.

 

Next improvements

  • Test this app with fif file containing events and make sure that the resulting events.tsv is correct