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8
 OperationInput formatSoftwareOutput formatComment / Link
1Merge joystick and MEG.fifdataHandler -merge.fifdata with MEG, eye tracker, joystick. Datahandler
2Maxfilter.fifmaxfilter.fifmaxfilter
3Detect saccades.fifFieldTrip.fifAsk script to Former user (Deleted)
4Mark bad data segments.fifMuse.fifReview data with Muse
5Manipulate markers to create conditions.fifdataHandler -adm.fif
  •  Creating conditions with dataHandler
6Run ICA and reject blink and cardiac components.fifFieldTrip and custom script.fifBlink and cardiac artifact scripts
7Create Evoked fields.fifdataHandler -sync -rbp.fif
  •  Using dataHandler to create ERFs

 

OperationInput formatSoftwareOutput formatComment / Link
1Segment T1 MRI.dic or otherrecon-all (Freesurfer)freesurfer folder
  •  Segment MRI with Freesurfer
9
2Import MEG and structural in BrainstormBrainstorm supported typesBrainstormBrainstorm internal
  •  Data import in Brainstorm

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 OperationInput formatSoftwareOutput formatComment / Link1  
3
 OperationInput formatSoftwareOutput formatComment / Link1    2    

Mesures

Minimum norm estimateBrainstorm internalBrainstormBrainstorm internalSee tutorials 20 and following of the Brainstorm tutorials
4Project sources on templateBrainstorm internalBrainstormBrainstorm internal

See tutorial on Brainstorm website

5Temporal averagesBrainstorm internalBrainstorm?Brainstorm internal?

ask Former user (Deleted) how he did it

6ROI design with statisticsBrainstorm internalMegAnovaBrainstorm internal
  •  Using statistics to define ROIs in Brainstorm
7   
2
  
  

FieldTrip source space time-frequency analysis

 
 

Statistiques

OperationInput formatSoftwareOutput formatComment / Link
1
     2     
Import fif into FieldTrip.fifFieldTripFieldTrip .matImport .fif into FieldTrip
2Run DICS source reconstruction(any)FieldTripFieldTrip .matLocalizing oscillatory sources using beamformer techniques
3Run ANOVAs on TF windows of interestFieldTrip .matMegAnova???Using Meganova to run ANOVAs
4Compute ROI imaginary coherenceFieldTrip .matFieldTripFieldTrip.matCausality analysis in FieldTrip

Related scenarios

Filter by label (Content by label)
showSpacefalse
sorttitle
cqllabel = "kb-scenario" in ("fusion","eye-tracker","joystick","meg","sources","time-frequency") and ancestor = "18678989"

 

http://www.fieldtriptoolbox.org/tutorial/beamformer