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Rename it into “app-compute-realigment-matrix”?
Allow the user to compute a destination.fif that is not the mean of all the runs but a specific run (this option is available is
mne-bids-pipeline. To do so, it would be best not to save the entire .fif file (i.e. the MEG signals) but to extract theraw.info[“dev_head_t"]["trans"]from this run and put it in an empty fif file, like we do when we compute the mean of the runs (it would save space).Make sure that it is okay to run this app after of before
app-head-pos, the order must not matter.