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If you want to run only one App:
go directly to the App and then execute it by clicking on “Execute”
BL creates a new process in the selected project, stages all of the input files you selected, and submits your App in a single step
If you want to run a small pipeline:
go to the page of the project linked to the App and then go the tab “Processes”
A Process is where you can submit one or a group of Apps that can share input/output datasets.
create a new process
stage any dataset from our archive to your process (each process can only process data that is either staged or generated by other Apps)
select the App you want to run
click submit
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If you have created a product.json, messages will be displayed directly in the Brainlife UI. For instance in the screenshot below, the success message “MaxFilter was applied successfully” was displayed. Error messages can be displayed as well if they are caught in the product.json (see product.json).
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See also output.log for details displayed when the App was running.